CDS

Accession Number TCMCG073C28016
gbkey CDS
Protein Id XP_010553813.1
Location join(3666398..3667184,3667334..3667642,3667760..3668043,3668206..3669240,3669896..3670064,3670411..3670568,3671197..3671445)
Gene LOC104823790
GeneID 104823790
Organism Tarenaya hassleriana

Protein

Length 996aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA268022
db_source XM_010555511.2
Definition PREDICTED: DNA-binding protein SMUBP-2 [Tarenaya hassleriana]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA-binding protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000049        [VIEW IN EMBL-EBI]
GO:0000166        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003678        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004003        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005524        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008144        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017076        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0030554        [VIEW IN EMBL-EBI]
GO:0032392        [VIEW IN EMBL-EBI]
GO:0032508        [VIEW IN EMBL-EBI]
GO:0032553        [VIEW IN EMBL-EBI]
GO:0032555        [VIEW IN EMBL-EBI]
GO:0032559        [VIEW IN EMBL-EBI]
GO:0032574        [VIEW IN EMBL-EBI]
GO:0032575        [VIEW IN EMBL-EBI]
GO:0035639        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043021        [VIEW IN EMBL-EBI]
GO:0043022        [VIEW IN EMBL-EBI]
GO:0043139        [VIEW IN EMBL-EBI]
GO:0043141        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043621        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097367        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATGTAGTAGCGTCATGTTTTCTTTGCAGAAGCATTAGGATTCCGTCGACCACAACGGCGACGGCGGCGTTCACGGTCTCACGGCGGCCACTCAAGTCGGTATGTCTCGTGCCGCACTACAAAGACGGTGAAATTCGTGTTTTCAGGTCGCGGAGGTTTGTCTGCAGCGGCGTTAATGGCGGAAACAAGCTCAGTAGTAGCGGTAGTTCGAGTAGTACCACGAAGAAGAAGCCTCGAAGGAAAAATAGCGTTTTTCAAAACCCTAAATCTCGAAAAATTGAGAAGAGAAACGGTATCGACACTGCTAGTGTTACCGGTACAAGTGGTAAAACAATTGTTGAGGAAAAGAAACAACAAGAAGGAAAGGTGCAGGAGCAGCAGAAGAGAGGTAGGGAATTGAATCTTCGTCCCTTGAGTCAGAATGGCGATCCCTTGGGGCGGAGAGATCTTGGTCGGAATGTGGTGAAGTGGATAAGCCAGGCGATGAAGGCCATGGCCTCGGATTTCGCCTCCGCAGAGATGCAGGGGGAGTTCTTGGAGTTGAGGCAGAGAGCGTGTTCGGGTTTAACGTTTGTGATACAGGCTCAGCCATATCTCAATGCAATTCCGATGCCGTTAGGGCTAGAATCGGCTTGTTTGAAGGCTGCGACCCATTACCCTAGTCTGTTCGATCATTTCCAGAGGGAGTTGCGAGATGTTCTTCAAGACTTGGAGCGCAAGCAATTGATTGGAAATTGGAAGGAGACAGAATCTTGGAAGCTGCTCAAGGAGATAGCAAATTCGGCTCAGCATCGGGCTGTTGCTCGGAAAGCAACACATCCAAAGTCTGTTCAAGGTGTTTTCGGGATGGACTTGGAGAAGGCCAAGGCTTTACAAACAAGGATTGATGAGTTCACCAGCCTTATGTCAGAATTGCTTCAAGTAGAACGAGATGCAGAACTGGAAGTGACACAAGAAGAGCTCGATGTTGTTCCAAATCCAGACGAGAACAGTGAGTCATCAAAGCCGATAGAGTTCTTGGTTAGGCATGGTGAAGCTCCACAAGAACTTTGTGACACAATTTGCAACTTATATGCAGTTAGTACCTCTACAGGACTTGGAGGTATGCACTTGGTTTCGTTTAAGGTGGGAGGAAACCACCGTCTCCCCCCAACTACCCTTTCTCCTGGTGACATGGTTTGTATACGGATATGCGACAGTAGGGGAGCTGGTGCGACTTCTTGCATGCAGGGGTTTGTTCACAACCTTGGGGATGACGGATGCAGCATCAGTGTGGCTTTAGAATCTCGCCATGGAGGTCCGACTTTCTCCAAGCTCTTTGGAAAGAGAGTGAGAATTGATCGCATTCATGGGTTGGCAGATACAGTAACATACGAGCGCAACTGTGAAGCCCTAATGTTGCTGCAGAAGCATGGTCTGCATAAGAAAAATCCATCAACTGCCGTGGTGGCGACACTATTTGGGGATGGAGAAGACATAACATGGCTAGAACAGAATGGTTTTGTAGATTGGTCCGAGGCAGAGTTGGCCGATGAACCAGTTGGGTGTGAACATTTTGATGTTTACCAGAGAAGAGCAATTGCTTTGGGGTTGAACAAAAAGCGGCCTGTTTTGATAGTTCAAGGACCTCCTGGCACTGGGAAGACCGGAATGCTCAAAGAGCTAATCACACTCGCTGTTCAGCAAGGGGAAAGAGTTCTTGTAACAGCACCAACCAATGCCGCTGTTGATAATATGGTCGAAAAGCTCTCATATCTTGGGCTAAACATTGTCCGTGTCGGAAATCCTGCGAGAATATCGTCAGGCGTTGCATCAAAATCTTTGGGGAAAATCGTAAACTCCAAACTTGCAAGCTTCCGAGCAGAACTTGAAAGGAAGAAATCAGATTTAAGAAAAGACCTCCGGCAATGTCTGGAGGATGATTCTCTGGCAGCTGGCATCCGGCAGCTCCTGAAACAGATTGGGAAAACGCTGAAGAAGAAGGAGAAGGAAACTGTCAAAGAAGTGCTGTCAAATGCTCAGGTAGTTCTTGCAACTAACACTGGAGCAGCTGACCCTTTGATTAGGAGGCTAGAAACATTTGATCTGGTTGTTATAGATGAAGCTGGTCAATCTATTGAGCCTTCCTGCTGGATCCCAATATTGCAAGGTAAACGCTGCATTCTTGCTGGTGATCATTGCCAGCTGGCACCGGTTATTCTATCAAGGAGAGCTTTAGAAGGCGGTCTCGGTATATCTTTACTGGAAAGAGCCACAACTTTACATGGTGGGGTTCTCGCGACTAAGCTAACGACTCAGTACCGTATGAATGATGTGATTGCTAGTTGGGCATCAAAGGAGATGTATGGTGGATTGTTGGAATCTTCTCCTACCGTGGCTTCTCATTTGCTGGTTGATTCTCCCTTTGTGAAGCGCACTTGGATAACGCAATGCCCTTTGCTTCTGCTTGACACAAGAATGCCGTATGGGAGCTTATCAGTGGGATGTGAGGAGCGTCTAGATCCAGCTGGTACCGGCTCATTTTACAATGAAGGGGAAGCAGATATCGTGGTTCATCACGTCTTTTCTTTAATTTATGCAGGTGTTAGTCCAACAGCTATTGCAGTTCAATCACCATATGTTGCGCAAGTGCAGCTCCTCAGAGAAAGGCTGGATGATTTTCCAGAGGCAGCGGGTGTCGAGGTTGCAACCATCGACAGCTTTCAAGGTCGGGAGGCTGATGCAGTGATAATATCGATGGTAAGGTCTAACAACTTAGGCGCAGTGGGATTCTTGGGAGATAGCAGGAGAATGAACGTCGCCATAACAAGAGCTCGGAAACACGTGGCAGTAGTGTGCGATAGCTCGACTATCTGCCACAACACGTTCCTGGCGAGGCTGCTGCGTCACGTACGCTACTTCGGGAGAGTGAAACACGCAGACCCTGGAAGCCTGGGAGGAGGCTCACCAGGACTTGGCATTGACCCAATGTTGCCTTCTCTCGGTTAA
Protein:  
MDVVASCFLCRSIRIPSTTTATAAFTVSRRPLKSVCLVPHYKDGEIRVFRSRRFVCSGVNGGNKLSSSGSSSSTTKKKPRRKNSVFQNPKSRKIEKRNGIDTASVTGTSGKTIVEEKKQQEGKVQEQQKRGRELNLRPLSQNGDPLGRRDLGRNVVKWISQAMKAMASDFASAEMQGEFLELRQRACSGLTFVIQAQPYLNAIPMPLGLESACLKAATHYPSLFDHFQRELRDVLQDLERKQLIGNWKETESWKLLKEIANSAQHRAVARKATHPKSVQGVFGMDLEKAKALQTRIDEFTSLMSELLQVERDAELEVTQEELDVVPNPDENSESSKPIEFLVRHGEAPQELCDTICNLYAVSTSTGLGGMHLVSFKVGGNHRLPPTTLSPGDMVCIRICDSRGAGATSCMQGFVHNLGDDGCSISVALESRHGGPTFSKLFGKRVRIDRIHGLADTVTYERNCEALMLLQKHGLHKKNPSTAVVATLFGDGEDITWLEQNGFVDWSEAELADEPVGCEHFDVYQRRAIALGLNKKRPVLIVQGPPGTGKTGMLKELITLAVQQGERVLVTAPTNAAVDNMVEKLSYLGLNIVRVGNPARISSGVASKSLGKIVNSKLASFRAELERKKSDLRKDLRQCLEDDSLAAGIRQLLKQIGKTLKKKEKETVKEVLSNAQVVLATNTGAADPLIRRLETFDLVVIDEAGQSIEPSCWIPILQGKRCILAGDHCQLAPVILSRRALEGGLGISLLERATTLHGGVLATKLTTQYRMNDVIASWASKEMYGGLLESSPTVASHLLVDSPFVKRTWITQCPLLLLDTRMPYGSLSVGCEERLDPAGTGSFYNEGEADIVVHHVFSLIYAGVSPTAIAVQSPYVAQVQLLRERLDDFPEAAGVEVATIDSFQGREADAVIISMVRSNNLGAVGFLGDSRRMNVAITRARKHVAVVCDSSTICHNTFLARLLRHVRYFGRVKHADPGSLGGGSPGLGIDPMLPSLG